OLEG TROTT, Ph.D. Columbia University



portrait

ot14@columbia.edu

Staff Scientist at The Scripps Research Institute, Molecular Graphics Lab


Software:


Publications:

  • O. Trott, A. J. Olson, AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization and multithreading, Journal of Computational Chemistry 31 (2010) 455-461
  • O. Trott, K. Siggers, B. Rost, A. G. Palmer, Protein conformational flexibility prediction using machine learning, Journal of Magnetic Resonance 192 (2008) 37-47
  • O. Trott, Ph.D. Thesis: Protein dynamics and its prediction using machine learning, Columbia University (2004) pdf
  • O. Trott, A. G. Palmer, Theoretical study of R rotating-frame and R2 free-precession relaxation in the presence of n-site chemical exchange, Journal of Magnetic Resonance 170 (2004) 104-112
  • O. Trott, D. Abergel, A. G. Palmer, An average-magnetization analysis of R relaxation outside of the fast-exchange limit, Molecular Physics 101-6 (2003) 753-763
  • L. Vugmeyster, O. Trott, C. J. McKnight, D. P. Raleigh, A. G. Palmer, Temperature-dependent dynamics of the villin headpiece helical subdomain, an unusually small thermostable protein, Journal of Molecular Biology 320 (2002) 841-854
  • O. Trott, A. G. Palmer, R relaxation outside of the fast-exchange limit, Journal of Magnetic Resonance 154 (2002) 157-160